Rheinheimera longhuensis sp. nov., isolated from a slightly alkaline lake, and emended description of genus Rheinheimera Brettar et al. 2002.
نویسندگان
چکیده
The bacterial strain LH2-2(T) was isolated from freshwater of Longhu Lake, a slightly alkaline lake (pH 8.8) in north-east China. Cells of strain LH2-2(T) were Gram-staining-negative, non-spore-forming rods, 0.3-0.5 µm wide and 2.0-4.0 µm long. Cells were motile by means of a single polar flagellum. The strain was strictly aerobic and heterotrophic and oxidase- and catalase-positive. Growth occurred at 0-36 °C (optimum, 26-34 °C), pH 6.5-11 (optimum, pH 8.0-8.6) and in the presence of 0-2 % (w/v) NaCl (optimum, 1%). Strain LH2-2(T) contained Q-8 as the major respiratory quinone. The major fatty acids were summed feature 3 (C(16:1)ω7c and/or iso-C(15:0) 2-OH; 21.9%), C(17:1)ω8c (18.9%), C(18:1)ω7c (16.4%) and C(16:0) (12.7%) after growth on marine agar 2216. The DNA G+C content was 47 mol% (T(m)). The 16S rRNA gene and a conserved portion of the gyrB gene were sequenced and used for phylogenetic analyses. Phylogenetic trees based on 16S rRNA gene and gyrB sequences showed that strain LH2-2(T) was associated with the genus Rheinheimera and closely related to the type strains of Rheinheimera species, and showed the highest 16S rRNA gene sequence similarity to Rheinheimera pacifica KMM 1406(T) (97.4%), R. aquimaris SW-353(T) (97.1%) and R. chironomi K19414(T) (96.5%). The DNA-DNA relatedness of strain LH2-2(T) to R. pacifica NBRC 103167(T), R. aquimaris JCM 14331(T) and R. chironomi LMG 23818(T) was 39, 31 and 23%, respectively. Based on these results, it is concluded that strain LH2-2(T) represents a novel species of the genus Rheinheimera, for which the name Rheinheimera longhuensis sp. nov. is proposed. The type strain is LH2-2(T) ( = CGMCC 1.7003(T) = NBRC 105632(T)). An emended description of the genus Rheinheimera is also provided.
منابع مشابه
Rheinheimera perlucida sp. nov., a marine bacterium of the Gammaproteobacteria isolated from surface water of the central Baltic Sea.
A bacterial isolate from the Baltic Sea, BA131(T), was characterized for its physiological and biochemical features, fatty acid profile, G+C content and phylogenetic position based on comparative 16S rRNA gene sequence analysis. The strain was isolated from surface water of the central Baltic Sea during the decay of a plankton bloom. Phylogenetic analyses of the 16S rRNA gene sequence revealed ...
متن کاملRheinheimera chironomi sp. nov., isolated from a chironomid (Diptera; Chironomidae) egg mass.
A Gram-negative, rod-shaped bacterial strain, designated K19414(T), was isolated from a chironomid (Diptera; Chironomidae) egg mass which was sampled from Kishon River in northern Israel. Phylogenetic analysis based on the 16S rRNA gene sequence positioned the novel strain among the genus Rheinheimera, with closest similarity to Rheinheimera pacifica KMM 1406(T). The levels of similarity to typ...
متن کاملRheinheimera aquatica sp. nov., an antimicrobial activity producing bacterium isolated from freshwater culture pond.
A bacterial strain designated GR5(T) was isolated from freshwater culture pond in Taiwan during the screening of bacteria for antimicrobial compounds and characterized using the polyphasic taxonomic approach. Strain GR5(T) was Gram-negative, aerobic, greenish-yellow colored, rod-shaped, and motile by means of a polar single flagellum. Growth occurred at 10-40 degrees C (optimum, 35 degrees C), ...
متن کاملDraft Genome Sequence of Rheinheimera sp. KL1, Isolated from a Freshwater Lake in Southern Saskatchewan, Canada
Rheinheimera sp. KL1 was isolated from an algal bloom in Katepwa Lake, Saskatchewan, Canada. The isolate shares genetic and physiological similarities with Rheinheimera tangshanensis. The genome is estimated to be 4,295,060 bp in length with a GC content of 46.37%. Sequence analysis suggests the strain carries a previously uncharacterized prophage.
متن کاملGenome Sequence of Rheinheimera salexigens sp. nov. Isolated from a Fishing Hook off O‘ahu, Hawai‘i
Rheinheimera salexigens KH87T is an obligately halophilic gammaproteobacterium. The strain's draft genome sequence, generated by the Roche 454 GS FLX+ platform, comprises two scaffolds of ~3.4 Mbp and ~3 kbp, with 3,030 protein-coding sequences and 58 tRNA coding regions. The G+C content is 42 mol%.
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید
ثبت ناماگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید
ورودعنوان ژورنال:
- International journal of systematic and evolutionary microbiology
دوره 62 Pt 12 شماره
صفحات -
تاریخ انتشار 2012